Source code for ginga.rv.main

# -- reference viewer for the Ginga toolkit.
# This is open-source software licensed under a BSD license.
# Please see the file LICENSE.txt for details.
"""This module handles the main reference viewer."""

# stdlib imports
import glob
import sys
import os
import logging
import logging.handlers
import threading
import traceback

# Local application imports
from ginga.misc.Bunch import Bunch
from ginga.misc import Task, ModuleManager, Settings, log
import ginga.version as version
import ginga.toolkit as ginga_toolkit
from ginga.util import paths, rgb_cms, json, compat

# Catch warnings

__all__ = ['ReferenceViewer']

default_layout = ['seq', {},
                   ['vbox', dict(name='top', width=1400, height=700),  # noqa
                    dict(row=['hbox', dict(name='menu')],
                    dict(row=['hpanel', dict(name='hpnl'),
                     ['ws', dict(name='left', wstype='tabs',  # noqa
                                 width=300, height=-1, group=2),
                      # (tabname, layout), ...
                      [("Info", ['vpanel', {},
                                 ['ws', dict(name='uleft', wstype='stack',
                                             height=250, group=3)],
                                 ['ws', dict(name='lleft', wstype='tabs',
                                             height=330, group=3)],
                     ['vbox', dict(name='main', width=600),
                      dict(row=['ws', dict(name='channels', wstype='tabs',
                                           group=1, use_toolbar=True,
                      dict(row=['ws', dict(name='cbar', wstype='stack',
                                           group=99)], stretch=0),
                      dict(row=['ws', dict(name='readout', wstype='stack',
                                           group=99)], stretch=0),
                      dict(row=['ws', dict(name='operations', wstype='stack',
                                           group=99)], stretch=0),
                     ['ws', dict(name='right', wstype='tabs',
                                 width=400, height=-1, group=2),
                      # (tabname, layout), ...
                      [("Dialogs", ['ws', dict(name='dialogs', wstype='tabs',
                     ], stretch=1),  # noqa
                    dict(row=['ws', dict(name='toolbar', wstype='stack',
                                         height=40, group=2)],
                    dict(row=['hbox', dict(name='status')], stretch=0),

plugins = [
    # hidden plugins, started at program initialization
    Bunch(module='Operations', workspace='operations', start=True,
          hidden=True, category='System', menu="Operations [G]",
    Bunch(module='Toolbar', workspace='toolbar', start=True,
          hidden=True, category='System', menu="Toolbar [G]", ptype='global'),
    Bunch(module='Pan', workspace='uleft', start=True,
          hidden=True, category='System', menu="Pan [G]", ptype='global'),
    Bunch(module='Info', tab='Synopsis', workspace='lleft', start=True,
          hidden=True, category='System', menu="Info [G]", ptype='global'),
    Bunch(module='Thumbs', tab='Thumbs', workspace='right', start=True,
          hidden=True, category='System', menu="Thumbs [G]", ptype='global'),
    Bunch(module='Contents', tab='Contents', workspace='right', start=True,
          hidden=True, category='System', menu="Contents [G]", ptype='global'),
    Bunch(module='Colorbar', workspace='cbar', start=True,
          hidden=True, category='System', menu="Colorbar [G]", ptype='global'),
    Bunch(module='Cursor', workspace='readout', start=True,
          hidden=True, category='System', menu="Cursor [G]", ptype='global'),
    Bunch(module='Errors', tab='Errors', workspace='right', start=True,
          hidden=True, category='System', menu="Errors [G]", ptype='global'),
    Bunch(module='Downloads', tab='Downloads', workspace='right', start=False,
          menu="Downloads [G]", category='Utils', ptype='global'),

    # optional, user-started plugins
    Bunch(module='Blink', tab='Blink Channels', workspace='right', start=False,
          menu="Blink Channels [G]", category='Analysis', ptype='global'),
    Bunch(module='Blink', workspace='dialogs', menu='Blink Images',
          category='Analysis', ptype='local'),
    Bunch(module='Crosshair', workspace='left', category='Analysis',
    Bunch(module='Cuts', workspace='dialogs', category='Analysis',
    Bunch(module='LineProfile', workspace='dialogs',
          category='Analysis.Datacube', ptype='local'),
    Bunch(module='Histogram', workspace='dialogs', category='Analysis',
    Bunch(module='Overlays', workspace='dialogs', category='Analysis',
    Bunch(module='Pick', workspace='dialogs', category='Analysis',
    Bunch(module='PixTable', workspace='dialogs', category='Analysis',
    Bunch(module='TVMark', workspace='dialogs', category='Analysis',
    Bunch(module='TVMask', workspace='dialogs', category='Analysis',
    Bunch(module='WCSMatch', tab='WCSMatch', workspace='right', start=False,
          menu="WCS Match [G]", category='Analysis', ptype='global'),
    Bunch(module='Command', tab='Command', workspace='lleft', start=False,
          menu="Command Line [G]", category='Debug', ptype='global'),
    Bunch(module='Log', tab='Log', workspace='right', start=False,
          menu="Logger Info [G]", category='Debug', ptype='global'),
    Bunch(module='MultiDim', workspace='lleft', category='Navigation',
    Bunch(module='RC', tab='RC', workspace='right', start=False,
          menu="Remote Control [G]", category='Remote', ptype='global'),
    Bunch(module='SAMP', tab='SAMP', workspace='right', start=False,
          menu="SAMP Client [G]", category='Remote', ptype='global'),
    Bunch(module='Compose', workspace='dialogs', category='RGB', ptype='local'),
    Bunch(module='ScreenShot', workspace='dialogs', category='RGB',
    Bunch(module='ColorMapPicker', tab='ColorMapPicker',
          menu="Set Color Map [G]", workspace='right', start=False,
          category='RGB', ptype='global'),
          menu="Set Color Map", workspace='dialogs', category='RGB',
    Bunch(module='PlotTable', workspace='dialogs', category='Table',
    Bunch(module='Catalogs', workspace='dialogs', category='Utils',
    Bunch(module='Drawing', workspace='dialogs', category='Utils',
    Bunch(module='AutoLoad', workspace='dialogs', category='Utils',
    #Bunch(module='Pipeline', workspace='dialogs', category='Utils',
    #      ptype='local'),
    Bunch(module='FBrowser', workspace='dialogs', category='Utils',
    Bunch(module='ChangeHistory', tab='History', workspace='right',
          menu="History [G]", start=False, category='Utils', ptype='global'),
    Bunch(module='Mosaic', workspace='dialogs', category='Utils', ptype='local'),
    Bunch(module='Collage', workspace='dialogs', category='Utils', ptype='local'),
    Bunch(module='FBrowser', tab='Open File', workspace='right',
          menu="Open File [G]", start=False, category='Utils', ptype='global'),
    Bunch(module='Preferences', workspace='dialogs', category='Utils',
    Bunch(module='Ruler', workspace='dialogs', category='Utils', ptype='local'),
    # TODO: Add SaveImage to File menu.
    Bunch(module='SaveImage', tab='SaveImage', workspace='right',
          menu="Save File [G]", start=False, category='Utils', ptype='global'),
    Bunch(module='WCSAxes', workspace='dialogs', category='Utils',
    Bunch(module='WBrowser', tab='Help', workspace='channels', start=False,
          menu="Help [G]", category='Help', ptype='global'),
    Bunch(module='Header', tab='Header', workspace='left', start=False,
          menu="Header [G]", hidden=False, category='Utils', ptype='global'),
    Bunch(module='Zoom', tab='Zoom', workspace='left', start=False,
          menu="Zoom [G]", category='Utils', ptype='global'),

[docs]class ReferenceViewer(object): """ This class exists solely to be able to customize the reference viewer startup. """ def __init__(self, layout=default_layout, plugins=plugins): self.layout = layout self.channels = ['Image'] self.default_plugins = plugins self.plugins = []
[docs] def add_plugin_spec(self, spec): self.plugins.append(spec)
[docs] def clear_default_plugins(self): self.plugins = []
[docs] def add_default_plugins(self, except_global=[], except_local=[]): """ Add the ginga-distributed default set of plugins to the reference viewer. """ # add default plugins for spec in self.default_plugins: ptype = spec.get('ptype', 'local') if ptype == 'global' and spec.module not in except_global: self.add_plugin_spec(spec) if ptype == 'local' and spec.module not in except_local: self.add_plugin_spec(spec)
[docs] def add_separately_distributed_plugins(self): groups = ['ginga.rv.plugins'] available_methods = [] for group in groups: discovered_plugins = compat.ep_get(group) for entry_point in discovered_plugins: try: method = entry_point.load() available_methods.append(method) except Exception as e: print("Error trying to load entry point %s: %s" % ( str(entry_point), str(e))) for method in available_methods: try: spec = method() self.add_plugin_spec(spec) except Exception as e: print("Error trying to instantiate external plugin using %s: %s" % ( str(method), str(e)))
[docs] def add_default_options(self, argprs): """ Adds the default reference viewer startup options to an ArgumentParser instance `argprs`. """ if hasattr(argprs, 'add_option'): # older OptParse add_argument = argprs.add_option else: # newer ArgParse add_argument = argprs.add_argument add_argument("--basedir", dest="basedir", metavar="NAME", help="Specify Ginga configuration area") add_argument("--bufsize", dest="bufsize", metavar="NUM", type=int, default=10, help="Buffer length to NUM") add_argument('-c', "--channels", dest="channels", help="Specify list of channels to create") add_argument("--debug", dest="debug", default=False, action="store_true", help="Enter the pdb debugger on main()") add_argument("--disable-plugins", dest="disable_plugins", metavar="NAMES", help="Specify plugins that should be disabled") add_argument("--display", dest="display", metavar="HOST:N", help="Use X display on HOST:N") add_argument("--fitspkg", dest="fitspkg", metavar="NAME", default=None, help="Prefer FITS I/O module NAME") add_argument("-g", "--geometry", dest="geometry", default=None, metavar="GEOM", help="X geometry for initial size and placement") add_argument("--modules", dest="modules", metavar="NAMES", help="Specify additional modules to load") add_argument("--norestore", dest="norestore", default=False, action="store_true", help="Don't restore the GUI from a saved layout") add_argument("--nosplash", dest="nosplash", default=False, action="store_true", help="Don't display the splash screen") add_argument("--numthreads", dest="numthreads", type=int, default=30, metavar="NUM", help="Start NUM threads in thread pool") add_argument("--opengl", dest="opengl", default=False, action="store_true", help="Use OpenGL acceleration") add_argument("--plugins", dest="plugins", metavar="NAMES", help="Specify additional plugins to load") add_argument("--profile", dest="profile", action="store_true", default=False, help="Run the profiler on main()") add_argument("--sep", dest="separate_channels", default=False, action="store_true", help="Load files in separate channels") add_argument("--suppress-fits-warnings", dest="suppress_fits_warnings", default=False, action="store_true", help="Suppress FITS verify warnings") add_argument("-t", "--toolkit", dest="toolkit", metavar="NAME", default=None, help="Prefer GUI toolkit (gtk|qt)") add_argument("--wcspkg", dest="wcspkg", metavar="NAME", default=None, help="Prefer WCS module NAME") log.addlogopts(argprs)
[docs] def main(self, options, args): """ Main routine for running the reference viewer. `options` is a ArgumentParser object that has been populated with values from parsing the command line. It should at least include the options from add_default_options() `args` is a list of arguments to the viewer after parsing out options. It should contain a list of files or URLs to load. """ # Create a logger logger = log.get_logger(name='ginga', options=options) if options.basedir is not None: paths.ginga_home = os.path.expanduser(options.basedir) # Get settings (preferences) basedir = paths.ginga_home if not os.path.exists(basedir): try: os.mkdir(basedir) except OSError as e: logger.warning( "Couldn't create ginga settings area (%s): %s" % ( basedir, str(e))) logger.warning("Preferences will not be able to be saved") # Set up preferences prefs = Settings.Preferences(basefolder=basedir, logger=logger) settings = prefs.create_category('general') settings.set_defaults(useMatplotlibColormaps=False, widgetSet='choose', WCSpkg='choose', FITSpkg='choose', suppress_fits_warnings=False, recursion_limit=2000, icc_working_profile=None, font_scaling_factor=None, save_layout=True, use_opengl=False, layout_file='layout', plugin_file='plugins.json', channel_prefix="Image") settings.load(onError='silent') # default of 1000 is a little too small sys.setrecursionlimit(settings.get('recursion_limit')) # So we can find our plugins sys.path.insert(0, basedir) package_home = os.path.split(sys.modules['ginga.version'].__file__)[0] child_dir = os.path.join(package_home, 'rv', 'plugins') sys.path.insert(0, child_dir) plugin_dir = os.path.join(basedir, 'plugins') sys.path.insert(0, plugin_dir) gc = os.path.join(basedir, "") have_ginga_config = os.path.exists(gc) # User configuration, earliest possible intervention if have_ginga_config: try: import ginga_config if hasattr(ginga_config, 'init_config'): ginga_config.init_config(self) except Exception as e: try: (type, value, tb) = sys.exc_info() tb_str = "\n".join(traceback.format_tb(tb)) except Exception: tb_str = "Traceback information unavailable." logger.error("Error processing Ginga config file: %s" % ( str(e))) logger.error("Traceback:\n%s" % (tb_str)) # Choose a toolkit if options.toolkit: toolkit = options.toolkit else: toolkit = settings.get('widgetSet', 'choose') if toolkit == 'choose': try: ginga_toolkit.choose() except ImportError as e: print("UI toolkit choose error: %s" % str(e)) sys.exit(1) else: ginga_toolkit.use(toolkit) tkname = ginga_toolkit.get_family()"Chosen toolkit (%s) family is '%s'" % ( ginga_toolkit.toolkit, tkname)) # these imports have to be here, otherwise they force the choice # of toolkit too early from ginga.rv.Control import GingaShell, GuiLogHandler if settings.get('useMatplotlibColormaps', False): # Add matplotlib color maps if matplotlib is installed try: from ginga import cmap cmap.add_matplotlib_cmaps(fail_on_import_error=False) except Exception as e: logger.warning( "failed to load matplotlib colormaps: %s" % (str(e))) # Set a working RGB ICC profile if user has one working_profile = settings.get('icc_working_profile', None) rgb_cms.working_profile = working_profile # User wants to customize the WCS package? if options.wcspkg: wcspkg = options.wcspkg else: wcspkg = settings.get('WCSpkg', 'choose') try: from ginga.util import wcsmod if wcspkg != 'choose': assert wcsmod.use(wcspkg) is True except Exception as e: logger.warning( "failed to set WCS package preference '{}': {}".format(wcspkg, e)) # User wants to customize the FITS package? if options.fitspkg: fitspkg = options.fitspkg else: fitspkg = settings.get('FITSpkg', 'choose') if options.suppress_fits_warnings: supp_warn = options.suppress_fits_warnings else: supp_warn = settings.get('suppress_fits_warnings', False) if supp_warn: import warnings from import fits warnings.simplefilter('ignore', fits.verify.VerifyWarning) try: from import io_fits from ginga.util import loader if fitspkg != 'choose': assert io_fits.use(fitspkg) is True # opener name is not necessarily the same opener = loader.get_opener( # set this opener as the priority one opener.priority = -99 except Exception as e: logger.warning( "failed to set FITS package preference '{}': {}".format(fitspkg, e)) # Create the dynamic module manager mm = ModuleManager.ModuleManager(logger) # Create and start thread pool ev_quit = threading.Event() thread_pool = Task.ThreadPool(options.numthreads, logger, ev_quit=ev_quit) thread_pool.startall() # Create the Ginga main object ginga_shell = GingaShell(logger, thread_pool, mm, prefs, ev_quit=ev_quit) if options.opengl: settings.set(use_opengl=True) layout_file = os.path.join(basedir, settings.get('layout_file', 'layout')) ginga_shell.set_layout(self.layout, layout_file=layout_file, save_layout=settings.get('save_layout', True)) # User configuration (custom star catalogs, etc.) if have_ginga_config: try: if hasattr(ginga_config, 'pre_gui_config'): ginga_config.pre_gui_config(ginga_shell) except Exception as e: try: (type, value, tb) = sys.exc_info() tb_str = "\n".join(traceback.format_tb(tb)) except Exception: tb_str = "Traceback information unavailable." logger.error("Error importing Ginga config file: %s" % ( str(e))) logger.error("Traceback:\n%s" % (tb_str)) # Build desired layout ginga_shell.build_toplevel(ignore_saved_layout=options.norestore) # Does user have a customized plugin setup? If so, override the # default plugins to be that plugin_file = settings.get('plugin_file', None) if plugin_file is not None: plugin_file = os.path.join(basedir, plugin_file) if os.path.exists(plugin_file):"Reading plugin file '%s'..." % (plugin_file)) try: with open(plugin_file, 'r') as in_f: buf = self.plugins = json.loads(buf) except Exception as e: logger.error("Error reading plugin file: %s" % (str(e))) # Did user specify a particular geometry? if options.geometry: ginga_shell.set_geometry(options.geometry) # make the list of disabled plugins if options.disable_plugins is not None: disabled_plugins = options.disable_plugins.lower().split(',') else: disabled_plugins = settings.get('disable_plugins', []) if not isinstance(disabled_plugins, list): disabled_plugins = disabled_plugins.lower().split(',') # Add GUI log handler (for "Log" global plugin) guiHdlr = GuiLogHandler(ginga_shell) guiHdlr.setLevel(options.loglevel) fmt = logging.Formatter(log.LOG_FORMAT) guiHdlr.setFormatter(fmt) logger.addHandler(guiHdlr) # Load any custom modules if options.modules is not None: modules = options.modules.split(',') else: modules = settings.get('global_plugins', []) if not isinstance(modules, list): modules = modules.split(',') for long_plugin_name in modules: if '.' in long_plugin_name: tmpstr = long_plugin_name.split('.') plugin_name = tmpstr[-1] pfx = '.'.join(tmpstr[:-1]) else: plugin_name = long_plugin_name pfx = None menu_name = "%s [G]" % (plugin_name) spec = Bunch(name=plugin_name, module=plugin_name, ptype='global', tab=plugin_name, menu=menu_name, category="Custom", workspace='right', pfx=pfx) self.add_plugin_spec(spec) # Load any custom local plugins if options.plugins is not None: plugins = options.plugins.split(',') else: plugins = settings.get('local_plugins', []) if not isinstance(plugins, list): plugins = plugins.split(',') for long_plugin_name in plugins: if '.' in long_plugin_name: tmpstr = long_plugin_name.split('.') plugin_name = tmpstr[-1] pfx = '.'.join(tmpstr[:-1]) else: plugin_name = long_plugin_name pfx = None spec = Bunch(module=plugin_name, workspace='dialogs', ptype='local', category="Custom", hidden=False, pfx=pfx) self.add_plugin_spec(spec) # Mark disabled plugins for spec in self.plugins: if spec.get('enabled', None) is None: spec['enabled'] = (False if spec.module.lower() in disabled_plugins else True) # submit plugin specs to shell ginga_shell.set_plugins(self.plugins) # start any plugins that have start=True ginga_shell.boot_plugins() ginga_shell.update_pending() # TEMP? tab_names = [name.lower() for name in ginga_shell.ds.get_tabnames(group=None)] if 'info' in tab_names: ginga_shell.ds.raise_tab('Info') if 'synopsis' in tab_names: ginga_shell.ds.raise_tab('Synopsis') if 'thumbs' in tab_names: ginga_shell.ds.raise_tab('Thumbs') # Add custom channels if options.channels is not None: channels = options.channels.split(',') else: channels = settings.get('channels', self.channels) if not isinstance(channels, list): channels = channels.split(',') if len(channels) == 0: # should provide at least one default channel? channels = [settings.get('channel_prefix', "Image")] # populate the initial channel lineup for item in channels: if isinstance(item, str): chname, wsname = item, None else: chname, wsname = item ginga_shell.add_channel(chname, workspace=wsname) ginga_shell.change_channel(chname) # User configuration (custom star catalogs, etc.) if have_ginga_config: try: if hasattr(ginga_config, 'post_gui_config'): ginga_config.post_gui_config(ginga_shell) except Exception as e: try: (type, value, tb) = sys.exc_info() tb_str = "\n".join(traceback.format_tb(tb)) except Exception: tb_str = "Traceback information unavailable." logger.error("Error processing Ginga config file: %s" % ( str(e))) logger.error("Traceback:\n%s" % (tb_str)) # Redirect warnings to logger for hdlr in logger.handlers: logging.getLogger('py.warnings').addHandler(hdlr) # Display banner the first time run, unless suppressed show_banner = True try: show_banner = settings.get('showBanner') except KeyError: # disable for subsequent runs settings.set(showBanner=False) if not os.path.exists(settings.preffile): if (not options.nosplash) and (len(args) == 0) and show_banner: ginga_shell.banner(raiseTab=True) # Handle inputs like "*.fits[ext]" that sys cmd cannot auto expand. expanded_args = [] for imgfile in args: if '*' in imgfile: if '[' in imgfile and imgfile.endswith(']'): s = imgfile.split('[') ext = '[' + s[1] imgfile = s[0] else: ext = '' for fname in glob.iglob(imgfile): expanded_args.append(fname + ext) else: expanded_args.append(imgfile) # Assume remaining arguments are fits files and load them. if not options.separate_channels: chname = channels[0] ginga_shell.gui_do(ginga_shell.open_uris, expanded_args, chname=chname) else: i = 0 num_channels = len(channels) for imgfile in expanded_args: if i < num_channels: chname = channels[i] i = i + 1 else: channel = ginga_shell.add_channel_auto() chname = ginga_shell.gui_do(ginga_shell.open_uris, [imgfile], chname=chname) try: try: # if there is a network component, start it if hasattr(ginga_shell, 'start'):"starting network interface...") ginga_shell.start() # Main loop to handle GUI events"entering mainloop...") ginga_shell.mainloop(timeout=0.001) except KeyboardInterrupt: logger.error("Received keyboard interrupt!") finally:"Shutting down...") ev_quit.set() sys.exit(0)
def reference_viewer(sys_argv): """Create reference viewer from command line.""" viewer = ReferenceViewer(layout=default_layout) viewer.add_default_plugins() viewer.add_separately_distributed_plugins() # Parse command line options with argparse module from argparse import ArgumentParser argprs = ArgumentParser(description="Run the Ginga reference viewer.") viewer.add_default_options(argprs) argprs.add_argument('-V', '--version', action='version', version='%(prog)s {}'.format(version.version)) (options, args) = argprs.parse_known_args(sys_argv[1:]) if options.display: os.environ['DISPLAY'] = options.display # Are we debugging this? if options.debug: import pdb'viewer.main(options, args)') # Are we profiling this? elif options.profile: import profile print(("%s profile:" % sys_argv[0])) profile.runctx('viewer.main(options, args)', dict(options=options, args=args, viewer=viewer), {}) else: viewer.main(options, args) def _main(): """Run from command line.""" reference_viewer(sys.argv) # END